Genomics

Leveraging long-read assemblies and machine learning to enhance short-read transposable element detection and genotyping

Leveraging long-read assemblies and machine le...

Genomics
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librarian
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Simultaneous single-cell CRISPR, RNA, and ATAC-seq enables multiomic CRISPR screens to identify gene regulatory relationships

Simultaneous single-cell CRISPR, RNA, and ATAC...

Genomics
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Eric Chow
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Population-scale cellular GUIDE-seq-2 and biochemical CHANGE-seq-R profiles reveal human genetic variation frequently affects Cas9 off-target activity

Population-scale cellular GUIDE-seq-2 and bioc...

Genomics
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librarian
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ERGA-BGE genome of Coenonympha oedippus: an IUCN endangered European butterfly species occurring in two ecotypes

ERGA-BGE genome of Coenonympha oedippus: an IU...

Genomics
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librarian
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The expanded Bostrychia moritziana genome unveils evolution in the most diverse and complex order of red algae

The expanded Bostrychia moritziana genome unve...

Genomics
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librarian
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Hi-C sequencing data from cortex laboratory rats

Hi-C sequencing data from cortex laboratory rats

Genomics
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librarian
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A haplotype-resolved reference genome for Eucalyptus grandis

A haplotype-resolved reference genome for Euca...

Genomics
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librarian
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Development of ferret immune repertoire reference resources and single-cell-based high-throughput profiling assays

Development of ferret immune repertoire refere...

Genomics
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librarian
1 view
Enhanced Computational and Experimental Approaches for Comparative Analysis of the Human Mycobiome

Enhanced Computational and Experimental Approa...

Genomics
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David Moyes
3 views
Joint single-cell profiling of CRISPR-Cas9 edits and transcriptomes reveals widespread off-target events and their effects on gene expression

Joint single-cell profiling of CRISPR-Cas9 edi...

Genomics
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Graham McVicker
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Genome Sequence of a Marine Threespine Stickleback (Gasterosteus aculeatus) from Rabbit Slough in the Cook Inlet

Genome Sequence of a Marine Threespine Stickle...

Genomics
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librarian
1 view
Powerful and accurate case-control analysis of spatial molecular data with deep learning-defined tissue microniches

Powerful and accurate case-control analysis of...

Genomics
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librarian
1 view
De-novo DNA Methylation of Bivalent Promoters Induces Gene Activation through PRC2 Displacement

De-novo DNA Methylation of Bivalent Promoters ...

Genomics
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Marketa Tomkova
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Distinguishing new from persistent infections at the strain level using longitudinal genotyping data

Distinguishing new from persistent infections ...

Genomics
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librarian
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Long-read detection of transposable element mobilization in the soma of hypomethylated Arabidopsis thaliana individuals

Long-read detection of transposable element mo...

Genomics
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librarian
1 view
EpiFoundation: A Foundation Model for Single-Cell ATAC-seq via Peak-to-Gene Alignment

EpiFoundation: A Foundation Model for Single-C...

Genomics
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librarian
5 views
Infection signatures of multiple Nucleocytoviricota virus lineages in the brown algae Undaria pinnatifida revealed by population-wide genome analysis

Infection signatures of multiple Nucleocytovir...

Genomics
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librarian
1 view
Genomic Characterization of Novel Endophyte Strains from Tall Fescue Shows Genome Fragmentation Post-Hybridization

Genomic Characterization of Novel Endophyte St...

Genomics
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librarian
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Genome-Wide Uncertainty-Moderated Extraction of Signal Annotations from Multi-Sample Functional Genomics Data

Genome-Wide Uncertainty-Moderated Extraction o...

Genomics
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librarian
1 view
CD4+ Mucosal-associated Invariant T (MAIT) cells express highly diverse T cell receptors

CD4+ Mucosal-associated Invariant T (MAIT) cel...

Genomics
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librarian
1 view
Genome report: Genome sequence of the hibiscus mealybug, Nipaecoccus viridis (Newstead), an invasive pest of citrus

Genome report: Genome sequence of the hibiscus...

Genomics
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librarian
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ERGA-BGE Reference Genome of Loboptera subterranea: a cave adapted cockroach endemic to the Canary Islands

ERGA-BGE Reference Genome of Loboptera subterr...

Genomics
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Rita Monteiro
2 views
Over-expression and increased copy numbers of a cytochrome P450 and two UDP-glucuronosyltransferase genes in macrocyclic lactone resistant Psoroptes ovis of cattle

Over-expression and increased copy numbers of ...

Genomics
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librarian
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Pan-cell type continuous chromatin state annotation of all IHEC epigenomes

Pan-cell type continuous chromatin state annot...

Genomics
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librarian
1 view
Chromosome-level genome assembly of Protandrena (Anthemurgus) passiflorae (Hymenoptera: Andrenidae), a host-plant specialist bee

Chromosome-level genome assembly of Protandren...

Genomics
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librarian
1 view
CobVar - a comprehensive resource of Vitamin B 12-associated genomic variants

CobVar - a comprehensive resource of Vitamin B...

Genomics
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librarian
1 view
Integrative Analysis of Drug-Gene Expression Signatures in Human Pluripotent Stem Cells Identifies Novel Drug Candidates for ALS and Monogenic Diseases

Integrative Analysis of Drug-Gene Expression S...

Genomics
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Cécile Martinat
1 view
Noncoding and Coding Mechanisms of Aging Heart Failure with Preserved Ejection Fraction with Thyroid Dysfunction

Noncoding and Coding Mechanisms of Aging Heart...

Genomics
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librarian
1 view
Seq-Scope-eXpanded: Spatial Omics Beyond Optical Resolution

Seq-Scope-eXpanded: Spatial Omics Beyond Optic...

Genomics
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librarian
9 views
Unraveling the inbreeding depression patterns in a self-pollinated eucalyptus population

Unraveling the inbreeding depression patterns ...

Genomics
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Filipe Manoel Ferreira
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Assessment of critically endangered Northern River Terrapin (Batagur baska) phylogeny through next-generation sequencing-based mitogenome analyses

Assessment of critically endangered Northern R...

Genomics
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Samrat Mondol
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Factors Influencing Phenomic Prediction: A Case Study on a Large Sorghum BCNAM Population

Factors Influencing Phenomic Prediction: A Cas...

Genomics
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librarian
2 views
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